Package: msy 0.1.19
msy: Estimation of Equilibrium Reference Points for Fsisheries
Methods to estimate equilibrium reference points for fisheries data. Currently data must be converted into FLStock objects of the FLR (Fisheries Library in R) style, defined in the R package FLCore.
Authors:
msy_0.1.19.tar.gz
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msy_0.1.19.tgz(r-4.4-any)msy_0.1.19.tgz(r-4.3-any)
msy_0.1.19.tar.gz(r-4.5-noble)msy_0.1.19.tar.gz(r-4.4-noble)
msy_0.1.19.tgz(r-4.4-emscripten)msy_0.1.19.tgz(r-4.3-emscripten)
msy.pdf |msy.html✨
msy/json (API)
NEWS
# Install 'msy' in R: |
install.packages('msy', repos = c('https://ices-tools-prod.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ices-tools-prod/msy/issues
- icesStocks - IcesStocks
Last updated 2 years agofrom:f410827d92. Checks:OK: 1 WARNING: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 22 2024 |
R-4.5-win | WARNING | Nov 22 2024 |
R-4.5-linux | WARNING | Nov 22 2024 |
R-4.4-win | WARNING | Nov 22 2024 |
R-4.4-mac | WARNING | Nov 22 2024 |
R-4.3-win | WARNING | Nov 22 2024 |
R-4.3-mac | WARNING | Nov 22 2024 |
Exports:Bevholtbevholt2eqsim_ggploteqsim_ploteqsim_plot_rangeeqsim_runeqsr_Bucklandeqsr_fiteqsr_plotinitialllikRickerSegregsegreg2Smooth_hockey
Dependencies:brewcallrclicolorspacecommonmarkcpp11data.treedescevaluatefansifarverFLCorefsggplot2gluegtablehighricesTAFisobanditeratorsknitrlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgbuildpkgconfigpkgloadplyrprocessxpspurrrR6RColorBrewerRcppreshape2rlangroxygen2rprojrootscalesstringistringrTAFtibbleutf8vctrsviridisLitewithrxfunxml2yaml
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Estimation of equilibrium reference points for fisheries | msy-package msy |
stock recruitment function | Bevholt |
stock recruitment function | bevholt2 |
Plots of the results from eqsim | eqsim_ggplot |
Plots of the results from eqsim | eqsim_plot |
Calculate Fmsy range | eqsim_plot_range |
Simulates the Equilibrium Results for a Population. | eqsim_run |
Stock recruitment fitting | eqsr_fit |
Plot Simulated Predictive Distribution of Recruitment | eqsr_plot |
icesStocks | icesStocks |
Get starting values for models | initial |
the log-likelihood of the rectuit function | llik |
Progress function | loader |
stock recruitment function | Ricker |
stock recruitment function | Segreg |
stock recruitment function | segreg2 |
stock recruitment function | Smooth_hockey |