Package: mixfishtools 0.4.3

Marc Taylor

mixfishtools: WGMIXFISH tools for reproducibility

Contains plot templates used in WGMIXFISH-ADVICE and Fisheries Overviews.

Authors:Marc Taylor, Mikel Aristegui, Johnathan Ball, Harriet Cole, Paul Dolder

# Install 'mixfishtools' in R:

install.packages('mixfishtools', repos = c('https://ices-tools-prod.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

refTable - Look-up reference table for stocks and associated attributes
stfFltStkSum - Data.frame containing short-term forecast summary of catch-related variables per stock and fleet combination
stfFltSum - Data.frame containing short-term forecast summary of catch-related variables per fleet
stfMtStkSum - Data.frame containing short-term forecast summary of catch-related variables per stock, fleet, and metier combination

On CRAN:

Last updated 1 months agofrom:5bcb664c0c. Checks:OK: 1 WARNING: 6. Indexed: no.

Last update: 2024-09-16
Started: 2024-06-20

Help page	Topics
Geometric Mean	gm_mean
Plot fleet landings taken up relative to recent landings / quota	plot_catch_change
Alluvial plot of catch	plot_catchAlluvial
Plot landings or catch compositions	plot_catchComp
Headline advice plot	plot_catchScenStk
Plot fleet effort to uptake stock quotas	plot_effortFltStk
Bar chart of landings by stock and metier	plot_landByMetStock
Pie chart of landings by stock	plot_landByStock
Metier to Metier to Fleet Sankey plot	plot_MetMetFleet
Plot over- and undershoot of stock quotas by fleet	plot_overUnderFltStk
Relative fleet effort to uptake stock quotas	plot_relEffortFltStk
Look-up reference table for stocks and associated attributes	refTable
Data.frame containing short-term forecast summary of catch-related variables per stock and fleet combination	stfFltStkSum
Data.frame containing short-term forecast summary of catch-related variables per fleet	stfFltSum
Data.frame containing short-term forecast summary of catch-related variables per stock, fleet, and metier combination	stfMtStkSum