Package: mixfishtools 0.4.0
Marc Taylor
mixfishtools: WGMIXFISH tools for reproducibility
Contains plot templates used in WGMIXFISH-ADVICE and Fisheries Overviews.
Authors:
mixfishtools_0.4.0.tar.gz
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mixfishtools_0.4.0.tgz(r-4.4-any)mixfishtools_0.4.0.tgz(r-4.3-any)
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mixfishtools.pdf |mixfishtools.html✨
mixfishtools/json (API)
| # Install 'mixfishtools' in R: |
| install.packages('mixfishtools', repos = c('https://ices-tools-prod.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ices-tools-dev/mixfishtools/issues
- refTable - Look-up reference table for stocks and associated attributes
- stfFltStkSum - Data.frame containing short-term forecast summary of catch-related variables per stock and fleet combination
- stfFltSum - Data.frame containing short-term forecast summary of catch-related variables per fleet
- stfMtStkSum - Data.frame containing short-term forecast summary of catch-related variables per stock, fleet, and metier combination
Last updated 7 days agofrom:ad759fdaa5. Checks:OK: 1 WARNING: 6. Indexed: no.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Sep 01 2024 |
| R-4.5-win | WARNING | Sep 01 2024 |
| R-4.5-linux | WARNING | Sep 01 2024 |
| R-4.4-win | WARNING | Sep 01 2024 |
| R-4.4-mac | WARNING | Sep 01 2024 |
| R-4.3-win | WARNING | Sep 01 2024 |
| R-4.3-mac | WARNING | Sep 01 2024 |
Exports:gm_meanplot_catch_changeplot_catchCompplot_catchScenStkplot_effortFltStkplot_landByMetStockplot_landByStockplot_MetMetFleetplot_overUnderFltStkplot_relEffortFltStk
Dependencies:base64encbslibcachemclicolorspacecpp11digestdplyrevaluatefansifarverfastmapfontawesomefsgenericsggplot2gluegtablehighrhtmltoolshtmlwidgetsigraphisobandjquerylibjsonliteknitrlabelinglatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnetworkD3nlmepillarpkgconfigR6rappdirsRColorBrewerrlangrmarkdownsassscalestibbletidyselecttinytexutf8vctrsviridisLitewithrxfunyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Geometric Mean | gm_mean |
| Plot fleet landings taken up relative to recent landings / quota | plot_catch_change |
| Plot landings or catch compositions | plot_catchComp |
| Headline advice plot | plot_catchScenStk |
| Plot fleet effort to uptake stock quotas | plot_effortFltStk |
| Bar chart of landings by stock and metier | plot_landByMetStock |
| Pie chart of landings by stock | plot_landByStock |
| Metier to Metier to Fleet Sankey plot | plot_MetMetFleet |
| Plot over- and undershoot of stock quotas by fleet | plot_overUnderFltStk |
| Relative fleet effort to uptake stock quotas | plot_relEffortFltStk |
| Look-up reference table for stocks and associated attributes | refTable |
| Data.frame containing short-term forecast summary of catch-related variables per stock and fleet combination | stfFltStkSum |
| Data.frame containing short-term forecast summary of catch-related variables per fleet | stfFltSum |
| Data.frame containing short-term forecast summary of catch-related variables per stock, fleet, and metier combination | stfMtStkSum |
