This package is considered a duplicate. The official version of this package is found at:https://flr.r-universe.dev/ggplotFL

Package: ggplotFL 2.7.2

Iago Mosqueira

ggplotFL: Using ggplot2 in FLR

Using ggplot2 for FLR. Provides (1) overloaded ggplot methods for various FLR classes, (2) ggplot-based versions of standard plots in the FLCore package, and (3) new geoms for using FLR objects.

Authors:Iago Mosqueira [cre, aut], Laurence T. Kell [aut]

ggplotFL_2.7.2.tar.gz
ggplotFL_2.7.2.zip(r-4.7)ggplotFL_2.7.2.zip(r-4.6)ggplotFL_2.7.2.zip(r-4.5)
ggplotFL_2.7.2.tgz(r-4.6-any)ggplotFL_2.7.2.tgz(r-4.5-any)
ggplotFL_2.7.2.tar.gz(r-4.7-any)ggplotFL_2.7.2.tar.gz(r-4.6-any)
ggplotFL_2.7.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ggplotFL/json (API)

# Install 'ggplotFL' in R:

install.packages('ggplotFL', repos = c('https://ices-tools-prod.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/flr/ggplotfl/issues

On CRAN:

visualization ggplot2 fisheries flr

7.90 score 4 stars 14 packages 634 scripts 26 exports 28 dependencies

Last updated from:0559155638. Checks:2 ERROR, 2 OK, 5 WARNING. Indexed: no.

Target	Result	Time
linux-devel-x86_64	ERROR	200
source / vignettes	OK	176
linux-release-x86_64	WARNING	228
macos-release-arm64	WARNING	144
macos-oldrel-arm64	WARNING	148
windows-devel	ERROR	162
windows-release	WARNING	195
windows-oldrel	WARNING	192
wasm-release	OK	117

Exports:%+%cohcorrplot eqlabel flpalette flpalette_colours flpalette_grads geom_flpar geom_flquantiles geom_worm ggplot human_numbers integer_breaks label_flqs modlabel phasePlot plot plotKobe plotLengths plotListFLQuants plotRunstest plotXval pubpng scale_colour_flr scale_fill_flr stat_flquantiles total

Dependencies:cli cowplot cpp11 data.table farver FLCore ggplot2 ggrepel glue gridExtra gtable isoband iterators labeling lattice lifecycle MASS Matrix patchwork R6 RColorBrewer Rcpp rlang S7 scales vctrs viridisLite withr

ggplotFL

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Rendered fromggplotFL.Rmdusingknitr::rmarkdown

Last update: 2018-06-13
Started: 2013-08-21

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
cohcorrplot	cohcorrplot cohcorrplot,FLCohort-method cohcorrplot,FLQuant-method
Functions create labels for FLSR models	eqlabel modlabel
A high-contrast palette to use in ggplotFL	flpalette flpalette_colours flpalette_grads scale_colour_flr
Horizontal lines for FLPar objects	geom_flpar
Sampling quantiles	geom_flquantiles stat_flquantiles
A geom for adding worms to probability intervals from geom_flquantiles	geom_worm
ggplot method for various FLR classes	ggplot,FLComp-method ggplot,FLComps-method ggplot,FLPar-method ggplot,FLQuant-method ggplot,FLQuants-method
A ggplot2 number formatter	human_numbers
Shows integer values in a programmatic and scalable fashion.	integer_breaks
A ggplot2 labeller for FLQuants	label_flqs
ggplot versions of FLR class plot() methods	plot,FLBiol,missing-method plot,FLBiols,missing-method plot,FLIndex,missing-method plot,FLIndexBiomass,missing-method plot,FLIndices,missing-method plot,FLPar,missing-method plot,FLQuant,FLQuant-method plot,FLQuant,missing-method plot,FLQuantPoint,FLQuant-method plot,FLQuantPoint,FLQuants-method plot,FLQuantPoint,missing-method plot,FLQuants,FLPar-method plot,FLQuants,FLPars-method plot,FLQuants,missing-method plot,FLSR,missing-method plot,FLSRs,ANY-method plot,FLSRs,missing-method plot,FLStock,FLPar-method plot,FLStock,FLStock-method plot,FLStock,FLStocks,missing-method plot,FLStock,FLStocks-method plot,FLStock,missing-method plot,FLStocks,FLPar-method plot,FLStocks,missing-method
Kobe plot of biomass and fishing mortality over MSY	plotKobe
Plot the runs test result for one or more time series	plotRunstest plotRunstest,FLQuant,FLQuant-method plotRunstest,FLQuants,FLQuants-method plotRunstest,FLQuants,missing-method
Plot of FLIndices cross-validation by retrospective hindcast	plotXval
Output ggplot object to PNG files with good quality settings.	pubpng
High contrast discrete and continuous palettes	scale_fill_flr