Package: FLSRTMB 1.1.7


Henning Winker
FLSRTMB: FLSR in TMB
Estimates FLR spawner recruitment relationships in TMB
Authors:
FLSRTMB_1.1.7.tar.gz
FLSRTMB_1.1.7.zip(r-4.7)FLSRTMB_1.1.7.zip(r-4.6)FLSRTMB_1.1.7.zip(r-4.5)
FLSRTMB_1.1.7.tgz(r-4.6-x86_64)FLSRTMB_1.1.7.tgz(r-4.6-arm64)FLSRTMB_1.1.7.tgz(r-4.5-x86_64)FLSRTMB_1.1.7.tgz(r-4.5-arm64)
FLSRTMB_1.1.7.tar.gz(r-4.7-arm64)FLSRTMB_1.1.7.tar.gz(r-4.7-x86_64)FLSRTMB_1.1.7.tar.gz(r-4.6-arm64)FLSRTMB_1.1.7.tar.gz(r-4.6-x86_64)
FLSRTMB_1.1.7.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
FLSRTMB/json (API)
NEWS
| # Install 'FLSRTMB' in R: |
| install.packages('FLSRTMB', repos = c('https://ices-tools-prod.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/flr/flsrtmb/issues
stock-recruitfisheriesflrtmbadcpp
Last updated from:cd351fe5a9. Checks:11 WARNING, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | WARNING | 208 | ||
| linux-devel-x86_64 | WARNING | 201 | ||
| source / vignettes | OK | 186 | ||
| linux-release-arm64 | WARNING | 194 | ||
| linux-release-x86_64 | WARNING | 223 | ||
| macos-release-arm64 | WARNING | 147 | ||
| macos-release-x86_64 | WARNING | 304 | ||
| macos-oldrel-arm64 | WARNING | 162 | ||
| macos-oldrel-x86_64 | WARNING | 350 | ||
| windows-devel | WARNING | 222 | ||
| windows-release | WARNING | 238 | ||
| windows-oldrel | WARNING | 202 | ||
| wasm-release | OK | 116 |
Exports:blimpriorbootstrapSRdpriorfrom_logitdfrom_logitsgmhsblimplot_bootstrapSRplotjitterplotsrsplotsrtsproductivityspr0ysprFyspriorsrrjittersrrTMBto_logitdto_logits
Dependencies:clicodetoolscowplotcpp11data.tabledigestdoFuturefarverFLCoreforeachfuturefuture.applyggplot2ggplotFLggrepelglobalsgluegridExtragtableisobanditeratorslabelinglatticelifecyclelistenvMASSMatrixparallellypatchworkprogressrR6RColorBrewerRcppRcppEigenrlangS7scalesTMBvctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| blimprior plot Plots the bounds of the hockey-stick break-point | blimprior |
| Bootstrap fits of mutliple stock-recruits relationships | bootstrapSR |
| dprior plot Plots the logit prior distribution for depensation | dprior |
| from_logitd() | from_logitd |
| from_logits() | from_logits |
| gm() | gm |
| hsblim() | hsblim |
| plots Jitter results | plotjitter |
| plotsrs based on plot(FLSRs) Plots FLSRs, i.e. multiple S-R relationships | plotsrs |
| Plots time series of observed and predicted recruitment | plotsrts |
| productivity() | productivity |
| spr0y() | spr0y |
| sprFy() | sprFy |
| sprior plot Plots the logit prior distribution for steepness | sprior |
| Jitter of S-R fits | srrjitter |
| Fits Stock Recruitment Relationships (SRR) in TMB | srrTMB srrTMB,FLSR-method srrTMB,FLSRs-method |
| to_logitd() | to_logitd |
| to_logits() | to_logits |