icesTAFDB

icesTAFDB is an R interface to access the web services of the ICES Transparent Assessment

icesTAFDB is implemented as an R package

and available on GitHub

Installation

icesTAFDB can be installed from https://ices-tools-prod.r-universe.dev using install.packages:

install.packages("icesTAFDB", repos = c('https://ices-tools-prod.r-universe.dev', 'https://cloud.r-project.org'))

Usage

For a summary of the package:

library(icesTAFDB)
?icesTAFDB

Examples

Test your connection to the DB

To test that you have the package set up correctly and have registered with ICES TAF, run test()

test()

## GETing ... https://adminweb06.ices.dk/api/whoami

## using user supplied token for user ICES\colin

## OK (HTTP 200).

## it works colin!
##  Your Claims are:
##    * user: admin

in the case you have not registered, you will get the following message

test(use_token = FALSE)

## GETing ... https://adminweb06.ices.dk/api/whoami

## no token used

## OK (HTTP 200).

## Could not find you! Please go to:  https://taf.ices.dk/github/  and follow the instructions to connect your github account.

to build this github_document

rmarkdown::render("README.Rmd")